BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A03LP1|AL428142
(1006 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1776 1958 0.0
>3x_Contig1776
Length = 26138
Score = 1958 bits (983), Expect = 0.0
Identities = 998/1006 (99%), Gaps = 1/1006 (0%)
Strand = Plus / Plus
Query: 1 gatccaatcttgaaatctgggatagggaaatctgatacgtaacttctaccagaaatcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9486 gatccaatcttgaaatctgggatagggaaatctgatacgtaacttctaccagaaatcaat 9545
Query: 61 ccagtttcaagccatgtggaaacatctctctcagggttttgtgaaggtttagcattctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9546 ccagtttcaagccatgtggaaacatctctctcagggttttgtgaaggtttagcattctcc 9605
Query: 121 ggcaaggatactagtataaaatctttagcagtgtacaatgcagttgtcatgttgtaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9606 ggcaaggatactagtataaaatctttagcagtgtacaatgcagttgtcatgttgtaatca 9665
Query: 181 gttttatattctgtatctttttttctgatgtttggctggtgactatcgtgatgtacaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9666 gttttatattctgtatctttttttctgatgtttggctggtgactatcgtgatgtacaaac 9725
Query: 241 tatcaatgaggatgttaaagtttgaccgtgtagaataaaatgagaaaacttaaaaagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9726 tatcaatgaggatgttaaagtttgaccgtgtagaataaaatgagaaaacttaaaaagaag 9785
Query: 301 tcacgactttttttcttaggtaaattgcagcaaacgattggagattagattactcactaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9786 tcacgactttttttcttaggtaaattgcagcaaacgattggagattagattactcactaa 9845
Query: 361 aagggctgcttatctgctctttttcctattgcattgaccctttatggttgaaaaccccta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9846 aagggctgcttatctgctctttttcctattgcattgaccctttatggttgaaaaccccta 9905
Query: 421 tcagttgtatccacttcttaaattttaaaacgagattaatctattaagaagatttcgaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9906 tcagttgtatccacttcttaaattttaaaacgagattaatctattaagaagatttcgaaa 9965
Query: 481 attagttgaatgcttccatatgaaggaaatatcgtatgaagtgattaaagagtcaaatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9966 attagttgaatgcttccatatgaaggaaatatcgtatgaagtgattaaagagtcaaatgt 10025
Query: 541 ataacgacatgcaccatatctggctggtgcagttacaataaagagtgtccattgaatttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10026 ataacgacatgcaccatatctggctggtgcagttacaataaagagtgtccattgaatttc 10085
Query: 601 atgagattgttttcgtgttctatttcatgagatttaactaagttaaagccgnacgtaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 10086 atgagattgttttcgtgttctatttcatgagatttaactaagttaaagccgtacgtaaat 10145
Query: 661 taattatacaaaccgagaagtggaaaatgtactaagaggttgaaaataagagtatgtkaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 10146 taattatacaaaccgagaagtggaaaatgtactaagaggttgaaaataagagtatgtgaa 10205
Query: 721 aaaaacgagattaggaattkatgawatattkcttggagcgcagtgaaacatcttgcttat 780
||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||
Sbjct: 10206 aaaaacgagattaggaattgatgaaatattgcttggagcgcagtgaaacatcttgcttat 10265
Query: 781 ttcaagaccttaccatcgacaatttccttgttttcaccgttaacaacaactggcttatcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10266 ttcaagaccttaccatcgacaatttccttgttttcaccgttaacaacaactggcttatcc 10325
Query: 841 caagcccacatgttgttgatgaattccttgtcttcttcctttgttgggk-caamttggag 899
|||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 10326 caagcccacatgttgttgatgaattccttgtcttcttcctttgttgggtccaacttggag 10385
Query: 900 tattcgtaggattcccaatctggagccacatcgaaggctggggcaaagtcttgaccacgg 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10386 tattcgtaggattcccaatctggagccacatcgaaggctggggcaaagtcttgaccacgg 10445
Query: 960 acaacgatggcaccgacaataccgttgttgttgttttcaccataaa 1005
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10446 acaacgatggcaccgacaataccgttgttgttgttttcaccataaa 10491
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8239
Number of Sequences: 1807
Number of extensions: 8239
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 1006
length of database: 10,358,551
effective HSP length: 16
effective length of query: 990
effective length of database: 10,329,639
effective search space: 10226342610
effective search space used: 10226342610
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)